A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15787658



Internal ID19859685
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:117676710..117680539hg38UCSC Ensembl
chr11:117547425..117551254hg19UCSC Ensembl
Cytoband11q23.3
Allele length
AssemblyAllele length
hg383830
hg193830
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4342282
Supporting Variants
Samples
Known GenesDSCAML1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15787658
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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