A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15784429



Internal ID19856431
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:154058275..154063104hg38UCSC Ensembl
chr7:153755360..153760189hg19UCSC Ensembl
Cytoband7q36.2
Allele length
AssemblyAllele length
hg384830
hg194830
Variant TypeOTHER copy number variation
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4043271
Supporting Variants
Samples
Known GenesDPP6
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15784429
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.001383


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