A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15781041



Internal ID19506341
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:257999..289549hg38UCSC Ensembl
chr1:227750..259300hg19UCSC Ensembl
Cytoband1p36.33
Allele length
AssemblyAllele length
hg3831551
hg1931551
Variant TypeOTHER copy number variation
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4033012
Supporting Variants
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15781041
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0


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