A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15777



Internal ID15495359
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:109679596..109710401hg38UCSC Ensembl
Outerchr1:109679125..109711723hg38UCSC Ensembl
Innerchr1:110222218..110253023hg19UCSC Ensembl
Outerchr1:110221747..110254345hg19UCSC Ensembl
Innerchr1:110023741..110054546hg18UCSC Ensembl
Outerchr1:110023270..110055868hg18UCSC Ensembl
Innerchr1:109934260..109965065hg17UCSC Ensembl
Outerchr1:109933789..109966387hg17UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg3832599
hg1932599
hg1832599
hg1732599
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10617
Supporting Variants
SamplesNA19132
Known GenesGSTM1, GSTM2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15777
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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