A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15654



Internal ID15493363
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:144186145..144266606hg38UCSC Ensembl
Outerchr7:144185632..144267888hg38UCSC Ensembl
Innerchr7:143883238..143963699hg19UCSC Ensembl
Outerchr7:143882725..143964981hg19UCSC Ensembl
Innerchr7:143514171..143594632hg18UCSC Ensembl
Outerchr7:143513658..143595914hg18UCSC Ensembl
Innerchr7:143320886..143401347hg17UCSC Ensembl
Outerchr7:143320373..143402629hg17UCSC Ensembl
Cytoband7q35
Allele length
AssemblyAllele length
hg3882257
hg1982257
hg1882257
hg1782257
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8227
Supporting Variants
SamplesNA18975
Known GenesARHGEF34P, ARHGEF35, CTAGE4, CTAGE8, OR2A1, OR2A20P, OR2A42, OR2A7, OR2A9P, RNU6-57P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15654
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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