A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15546



Internal ID15829559
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:170681384..170734826hg38UCSC Ensembl
Outerchr6:170681357..170736417hg38UCSC Ensembl
Innerchr6:170990472..171043914hg19UCSC Ensembl
Outerchr6:170990445..171045505hg19UCSC Ensembl
Innerchr6:170832397..170885839hg18UCSC Ensembl
Outerchr6:170832370..170887430hg18UCSC Ensembl
Innerchr6:170908104..170961546hg17UCSC Ensembl
Outerchr6:170908077..170963137hg17UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg3855061
hg1955061
hg1855061
hg1755061
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8022
Supporting Variants
SamplesNA10863
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15546
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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