A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15338



Internal ID15830611
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32489133..32510372hg38UCSC Ensembl
Outerchr6:32488561..32511842hg38UCSC Ensembl
Innerchr6:32456910..32478149hg19UCSC Ensembl
Outerchr6:32456338..32479619hg19UCSC Ensembl
Innerchr6:32564888..32586127hg18UCSC Ensembl
Outerchr6:32564316..32587597hg18UCSC Ensembl
Innerchr6:32564888..32586127hg17UCSC Ensembl
Outerchr6:32564316..32587597hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3823282
hg1923282
hg1823282
hg1723282
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA12155
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15338
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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