A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15330



Internal ID15843876
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:9819828..9834920hg38UCSC Ensembl
Outerchr5:9819036..9835533hg38UCSC Ensembl
Innerchr5:9819940..9835032hg19UCSC Ensembl
Outerchr5:9819148..9835645hg19UCSC Ensembl
Innerchr5:9872940..9888032hg18UCSC Ensembl
Outerchr5:9872148..9888645hg18UCSC Ensembl
Innerchr5:9872940..9888032hg17UCSC Ensembl
Outerchr5:9872148..9888645hg17UCSC Ensembl
Cytoband5p15.2
Allele length
AssemblyAllele length
hg3816498
hg1916498
hg1816498
hg1716498
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10664
Supporting Variants
SamplesNA19221
Known GenesLOC285692
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15330
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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