A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15279



Internal ID15831104
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32463329..32467327hg38UCSC Ensembl
Outerchr6:32462722..32470802hg38UCSC Ensembl
Innerchr6:32431106..32435104hg19UCSC Ensembl
Outerchr6:32430499..32438579hg19UCSC Ensembl
Innerchr6:32539084..32543082hg18UCSC Ensembl
Outerchr6:32538477..32546557hg18UCSC Ensembl
Innerchr6:32539084..32543082hg17UCSC Ensembl
Outerchr6:32538477..32546557hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg388081
hg198081
hg188081
hg178081
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA12740
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15279
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer