A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15209



Internal ID15496311
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:154387379..154403486hg38UCSC Ensembl
Outerchr6:154386204..154405599hg38UCSC Ensembl
Innerchr6:154708513..154724620hg19UCSC Ensembl
Outerchr6:154707338..154726733hg19UCSC Ensembl
Innerchr6:154750205..154766312hg18UCSC Ensembl
Outerchr6:154749030..154768425hg18UCSC Ensembl
Innerchr6:154800626..154816733hg17UCSC Ensembl
Outerchr6:154799451..154818846hg17UCSC Ensembl
Cytoband6q25.2
Allele length
AssemblyAllele length
hg3819396
hg1919396
hg1819396
hg1719396
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7981
Supporting Variants
SamplesNA19173
Known GenesCNKSR3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15209
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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