A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15151



Internal ID15497813
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29732383..29820686hg38UCSC Ensembl
Outerchr6:29724796..29826342hg38UCSC Ensembl
Innerchr6:29700160..29788463hg19UCSC Ensembl
Outerchr6:29692573..29794119hg19UCSC Ensembl
Innerchr6:29808139..29896442hg18UCSC Ensembl
Outerchr6:29800552..29902098hg18UCSC Ensembl
Innerchr6:29808139..29896442hg17UCSC Ensembl
Outerchr6:29800552..29902098hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg38101547
hg19101547
hg18101547
hg17101547
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10809
Supporting Variants
SamplesNA19240
Known GenesHCG4, HLA-F, HLA-F-AS1, IFITM4P, LOC554223
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15151
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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