A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15068



Internal ID15830460
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:26887953..27002785hg38UCSC Ensembl
Outerchr6:26887682..27003585hg38UCSC Ensembl
Innerchr6:26855732..26970564hg19UCSC Ensembl
Outerchr6:26855461..26971364hg19UCSC Ensembl
Innerchr6:26963711..27078543hg18UCSC Ensembl
Outerchr6:26963440..27079343hg18UCSC Ensembl
Innerchr6:26963711..27078543hg17UCSC Ensembl
Outerchr6:26963440..27079343hg17UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg38115904
hg19115904
hg18115904
hg17115904
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10806
Supporting Variants
SamplesNA12155
Known GenesGUSBP2, LINC00240
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15068
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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