A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15039



Internal ID15831388
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:257232..288746hg38UCSC Ensembl
Outerchr6:256415..289242hg38UCSC Ensembl
Innerchr6:257232..288746hg19UCSC Ensembl
Outerchr6:256415..289242hg19UCSC Ensembl
Innerchr6:202232..233746hg18UCSC Ensembl
Outerchr6:201415..234242hg18UCSC Ensembl
Innerchr6:202232..233746hg17UCSC Ensembl
Outerchr6:201415..234242hg17UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg3832828
hg1932828
hg1832828
hg1732828
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10799
Supporting Variants
SamplesNA12740
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15039
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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