A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15015



Internal ID15834693
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:170670396..170670396hg38UCSC Ensembl
Outerchr6:170670326..170671503hg38UCSC Ensembl
Innerchr6:170979484..170979484hg19UCSC Ensembl
Outerchr6:170979414..170980591hg19UCSC Ensembl
Innerchr6:170821409..170821409hg18UCSC Ensembl
Outerchr6:170821339..170822516hg18UCSC Ensembl
Innerchr6:170897116..170897116hg17UCSC Ensembl
Outerchr6:170897046..170898223hg17UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg381178
hg191178
hg181178
hg171178
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8022
Supporting Variants
SamplesNA18537
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15015
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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