A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14886



Internal ID15829581
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:31354936..31355273hg38UCSC Ensembl
Outerchr6:31354336..31355813hg38UCSC Ensembl
Innerchr6:31322713..31323050hg19UCSC Ensembl
Outerchr6:31322113..31323590hg19UCSC Ensembl
Innerchr6:31430692..31431029hg18UCSC Ensembl
Outerchr6:31430092..31431569hg18UCSC Ensembl
Innerchr6:31430692..31431029hg17UCSC Ensembl
Outerchr6:31430092..31431569hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg381478
hg191478
hg181478
hg171478
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10818
Supporting Variants
SamplesNA10863
Known GenesHLA-B, MIR6891
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv14886
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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