A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14439940



Internal ID22236538
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:45434812..45434873hg38UCSC Ensembl
chrX:45294057..45294118hg19UCSC Ensembl
CytobandXp11.3
Allele length
AssemblyAllele length
hg3862
hg1962
Variant TypeCNV line1 deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3233395
Supporting Variants
SamplesHG00733
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsAbsence of a L1 mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nssv14439940
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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