A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14421978



Internal ID22160309
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:49076224..49076701hg38UCSC Ensembl
chr12:49470007..49470484hg19UCSC Ensembl
Cytoband12q13.12
Allele length
AssemblyAllele length
hg38478
hg19478
Variant TypeCNV alu deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3178883
Supporting Variants
SamplesHG00514
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsAbsence of a AluS mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nssv14421978
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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