A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14408835



Internal ID22288883
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:38510614..38510927hg38UCSC Ensembl
chr20:37139257..37139570hg19UCSC Ensembl
Cytoband20q11.23
Allele length
AssemblyAllele length
hg38314
hg19314
Variant TypeCNV alu deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3187433
Supporting Variants
SamplesNA19240
Known GenesRALGAPB
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsAbsence of a AluY mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nssv14408835
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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