A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14405335



Internal ID22314822
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:68397517..68397583hg38UCSC Ensembl
chr15:68689856..68689922hg19UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg3867
hg1967
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3288228
Supporting Variants
SamplesNA19240
Known GenesITGA11
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nssv14405335
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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