A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14392660



Internal ID22287898
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:55621511..55621511hg38UCSC Ensembl
chr18:53288742..53288742hg19UCSC Ensembl
Cytoband18q21.2
Allele length
AssemblyAllele length
hg3854
hg1954
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3543139
Supporting Variants
SamplesNA19240
Known GenesTCF4
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nssv14392660
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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