A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14372708



Internal ID22294301
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:55038729..55038729hg38UCSC Ensembl
chr17:53116090..53116090hg19UCSC Ensembl
Cytoband17q22
Allele length
AssemblyAllele length
hg38337
hg19337
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3520027
Supporting Variants
SamplesNA19240
Known GenesSTXBP4
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsInsertion of a AluY mobile element relative to the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nssv14372708
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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