A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14252001



Internal ID21306844
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:18452078..18571332hg38UCSC Ensembl
Outerchr17:18416548..18592992hg38UCSC Ensembl
Innerchr17:18355392..18474646hg19UCSC Ensembl
Outerchr17:18319862..18496306hg19UCSC Ensembl
Innerchr17:18296117..18415371hg18UCSC Ensembl
Outerchr17:18260587..18437031hg18UCSC Ensembl
Cytoband17p11.2
Allele length
AssemblyAllele length
hg38176445
hg19176445
hg18176445
Variant TypeCNV deletion
Copy Number1
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3169646
Supporting Variants
SamplesNGO_30
Known GenesCCDC144B, FAM106A, KRT16P1, LGALS9C, LOC339240, USP32P2
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nssv14252001
Frequency
Sample Size93
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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