A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419770



Internal ID15236824
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:34363995..34364284hg38UCSC Ensembl
Innerchr15:34656196..34656485hg19UCSC Ensembl
Innerchr15:32443488..32443777hg18UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38290
hg19290
hg18290
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv820052
Supporting Variants
SamplesAK1
Known GenesLPCAT4
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419770
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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