A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419623



Internal ID15583407
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:38991221..38995507hg38UCSC Ensembl
Innerchr8:38848740..38853026hg19UCSC Ensembl
Innerchr8:38967897..38972183hg18UCSC Ensembl
Cytoband8p11.22
Allele length
AssemblyAllele length
hg384287
hg194287
hg184287
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv820251
Supporting Variants
SamplesAK1
Known GenesTM2D2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419623
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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