A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419607



Internal ID15583391
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:58347223..58351361hg38UCSC Ensembl
Innerchr17:56424584..56428722hg19UCSC Ensembl
Innerchr17:53779583..53783721hg18UCSC Ensembl
Cytoband17q22
Allele length
AssemblyAllele length
hg384139
hg194139
hg184139
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819948
Supporting Variants
SamplesAK1
Known GenesBZRAP1-AS1, SUPT4H1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419607
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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