A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419579



Internal ID15236633
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:59843387..59847194hg38UCSC Ensembl
Innerchr1:60309059..60312866hg19UCSC Ensembl
Innerchr1:60081647..60085454hg18UCSC Ensembl
Cytoband1p32.1
Allele length
AssemblyAllele length
hg383808
hg193808
hg183808
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819901
Supporting Variants
SamplesAK1
Known GenesHOOK1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419579
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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