A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419521



Internal ID15236575
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:178203925..178207190hg38UCSC Ensembl
Innerchr5:177630926..177634191hg19UCSC Ensembl
Innerchr5:177563532..177566797hg18UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg383266
hg193266
hg183266
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv820182
Supporting Variants
SamplesAK1
Known GenesHNRNPAB
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419521
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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