A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419356



Internal ID15236410
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:49845922..49847825hg38UCSC Ensembl
Innerchr17:47923284..47925187hg19UCSC Ensembl
Innerchr17:45278283..45280186hg18UCSC Ensembl
Cytoband17q21.33
Allele length
AssemblyAllele length
hg381904
hg191904
hg181904
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819145
Supporting Variants
SamplesAK1
Known GenesFLJ45513, TAC4
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419356
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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