A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419254



Internal ID15236308
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:25123693..25125090hg38UCSC Ensembl
Innerchr4:25125315..25126712hg19UCSC Ensembl
Innerchr4:24734413..24735810hg18UCSC Ensembl
Cytoband4p15.2
Allele length
AssemblyAllele length
hg381398
hg191398
hg181398
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819375
Supporting Variants
SamplesAK1
Known GenesSEPSECS
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419254
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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