A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419222



Internal ID15236276
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:41988208..41989487hg38UCSC Ensembl
Innerchr21:43408317..43409596hg19UCSC Ensembl
Innerchr21:42281386..42282665hg18UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg381280
hg191280
hg181280
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv820038
Supporting Variants
SamplesAK1
Known GenesZBTB21
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419222
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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