A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419072



Internal ID15236126
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:114056249..114056969hg38UCSC Ensembl
Innerchr6:114377413..114378133hg19UCSC Ensembl
Innerchr6:114484106..114484826hg18UCSC Ensembl
Cytoband6q21
Allele length
AssemblyAllele length
hg38721
hg19721
hg18721
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819824
Supporting Variants
SamplesAK1
Known GenesHS3ST5
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419072
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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