A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419067



Internal ID15236121
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:4933384..4934128hg38UCSC Ensembl
Innerchr17:4836679..4837423hg19UCSC Ensembl
Innerchr17:4777459..4778164hg18UCSC Ensembl
Cytoband17p13.2
Allele length
AssemblyAllele length
hg38745
hg19745
hg18706
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819218
Supporting Variants
SamplesAK1
Known GenesGP1BA
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419067
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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