A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1419057



Internal ID15236111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:140126088..140126779hg38UCSC Ensembl
Innerchr5:139505673..139506364hg19UCSC Ensembl
Innerchr5:139485857..139486548hg18UCSC Ensembl
Cytoband5q31.3
Allele length
AssemblyAllele length
hg38692
hg19692
hg18692
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819068
Supporting Variants
SamplesAK1
Known GenesIGIP
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1419057
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer