A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1418920



Internal ID15235974
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:156741918..156742285hg38UCSC Ensembl
Innerchr1:156711710..156712077hg19UCSC Ensembl
Innerchr1:154978334..154978701hg18UCSC Ensembl
Cytoband1q23.1
Allele length
AssemblyAllele length
hg38368
hg19368
hg18368
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819403
Supporting Variants
SamplesAK1
Known GenesHDGF
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1418920
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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