A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1418777



Internal ID15235831
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:38249914..38371621hg38UCSC Ensembl
Innerchr7:38289515..38411222hg19UCSC Ensembl
Innerchr7:38256040..38377747hg18UCSC Ensembl
Cytoband7p14.1
Allele length
AssemblyAllele length
hg38121708
hg19121708
hg18121708
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv820039
Supporting Variants
SamplesAK1
Known GenesTARP, TRG-AS1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1418777
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer