A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1418667



Internal ID15235721
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:38728395..38745794hg38UCSC Ensembl
Innerchr2:38955537..38972936hg19UCSC Ensembl
Innerchr2:38809041..38826440hg18UCSC Ensembl
Cytoband2p22.1
Allele length
AssemblyAllele length
hg3817400
hg1917400
hg1817400
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819664
Supporting Variants
SamplesAK1
Known GenesGALM, SRSF7
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1418667
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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