A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1418642



Internal ID15235696
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:43402696..43416799hg38UCSC Ensembl
Innerchr21:44822576..44836679hg19UCSC Ensembl
Innerchr21:43647004..43661107hg18UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg3814104
hg1914104
hg1814104
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819251
Supporting Variants
SamplesAK1
Known GenesSIK1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1418642
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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