A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1418581



Internal ID15236968
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:33081781..33091414hg38UCSC Ensembl
Innerchr6:33049558..33059191hg19UCSC Ensembl
Innerchr6:33157536..33167169hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg389634
hg199634
hg189634
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv819171
Supporting Variants
SamplesAK1
Known GenesHLA-DPB1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1418581
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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