A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1418560



Internal ID15236947
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:153167653..153167957hg38UCSC Ensembl
Innerchr3:152885442..152885746hg19UCSC Ensembl
Innerchr3:154368132..154368436hg18UCSC Ensembl
Cytoband3q25.2
Allele length
AssemblyAllele length
hg38305
hg19305
hg18305
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv820284
Supporting Variants
SamplesAK1
Known GenesRAP2B
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nssv1418560
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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