A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14155



Internal ID15840567
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32582861..32583204hg38UCSC Ensembl
Outerchr6:32581461..32583936hg38UCSC Ensembl
Innerchr6:32550638..32550981hg19UCSC Ensembl
Outerchr6:32549238..32551713hg19UCSC Ensembl
Innerchr6:32658616..32658959hg18UCSC Ensembl
Outerchr6:32657216..32659691hg18UCSC Ensembl
Innerchr6:32658616..32658959hg17UCSC Ensembl
Outerchr6:32657216..32659691hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg382476
hg192476
hg182476
hg172476
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA18980
Known GenesHLA-DRB1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv14155
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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