A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14036



Internal ID15841278
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32514821..32516141hg38UCSC Ensembl
Outerchr6:32513583..32517424hg38UCSC Ensembl
Innerchr6:32482598..32483918hg19UCSC Ensembl
Outerchr6:32481360..32485201hg19UCSC Ensembl
Innerchr6:32590576..32591896hg18UCSC Ensembl
Outerchr6:32589338..32593179hg18UCSC Ensembl
Innerchr6:32590576..32591896hg17UCSC Ensembl
Outerchr6:32589338..32593179hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg383842
hg193842
hg183842
hg173842
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA19007
Known GenesHLA-DRB5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv14036
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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