A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv14021776



Internal ID21172216
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:189094709..189094709hg38UCSC Ensembl
chr2:189959435..189959435hg19UCSC Ensembl
Cytoband2q32.2
Allele length
AssemblyAllele length
hg38254
hg19254
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3059251
Supporting Variants
SamplesNA12878
Known GenesCOL5A2
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)nssv14021776
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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