A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13957



Internal ID15830091
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:291563..381993hg38UCSC Ensembl
Outerchr6:290368..383320hg38UCSC Ensembl
Innerchr6:291563..381993hg19UCSC Ensembl
Outerchr6:290368..383320hg19UCSC Ensembl
Innerchr6:236563..326993hg18UCSC Ensembl
Outerchr6:235368..328320hg18UCSC Ensembl
Innerchr6:236563..326993hg17UCSC Ensembl
Outerchr6:235368..328320hg17UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg3892953
hg1992953
hg1892953
hg1792953
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10799
Supporting Variants
SamplesNA11830
Known GenesDUSP22
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13957
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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