A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13942



Internal ID15839002
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32627393..32631700hg38UCSC Ensembl
Outerchr6:32626530..32632203hg38UCSC Ensembl
Innerchr6:32595170..32599477hg19UCSC Ensembl
Outerchr6:32594307..32599980hg19UCSC Ensembl
Innerchr6:32703148..32707455hg18UCSC Ensembl
Outerchr6:32702285..32707958hg18UCSC Ensembl
Innerchr6:32703148..32707455hg17UCSC Ensembl
Outerchr6:32702285..32707958hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg385674
hg195674
hg185674
hg175674
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA18942
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13942
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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