A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13922



Internal ID15827638
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:257232..290368hg38UCSC Ensembl
Outerchr6:256415..291563hg38UCSC Ensembl
Innerchr6:257232..290368hg19UCSC Ensembl
Outerchr6:256415..291563hg19UCSC Ensembl
Innerchr6:202232..235368hg18UCSC Ensembl
Outerchr6:201415..236563hg18UCSC Ensembl
Innerchr6:202232..235368hg17UCSC Ensembl
Outerchr6:201415..236563hg17UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg3835149
hg1935149
hg1835149
hg1735149
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10799
Supporting Variants
SamplesNA07029
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13922
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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