A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13877



Internal ID15836010
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:31270843..31278447hg38UCSC Ensembl
Outerchr6:31270175..31279234hg38UCSC Ensembl
Innerchr6:31238620..31246224hg19UCSC Ensembl
Outerchr6:31237952..31247011hg19UCSC Ensembl
Innerchr6:31346599..31354203hg18UCSC Ensembl
Outerchr6:31345931..31354990hg18UCSC Ensembl
Innerchr6:31346599..31354203hg17UCSC Ensembl
Outerchr6:31345931..31354990hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg389060
hg199060
hg189060
hg179060
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10815
Supporting Variants
SamplesNA18563
Known GenesHLA-C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13877
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer