A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13672



Internal ID15839054
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32463329..32470802hg38UCSC Ensembl
Outerchr6:32462722..32471773hg38UCSC Ensembl
Innerchr6:32431106..32438579hg19UCSC Ensembl
Outerchr6:32430499..32439550hg19UCSC Ensembl
Innerchr6:32539084..32546557hg18UCSC Ensembl
Outerchr6:32538477..32547528hg18UCSC Ensembl
Innerchr6:32539084..32546557hg17UCSC Ensembl
Outerchr6:32538477..32547528hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg389052
hg199052
hg189052
hg179052
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA18942
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13672
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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