A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13552



Internal ID15492094
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29918444..29922281hg38UCSC Ensembl
Outerchr6:29917044..29924739hg38UCSC Ensembl
Innerchr6:29886221..29890058hg19UCSC Ensembl
Outerchr6:29884821..29892516hg19UCSC Ensembl
Innerchr6:29994200..29998037hg18UCSC Ensembl
Outerchr6:29992800..30000495hg18UCSC Ensembl
Innerchr6:29994200..29998037hg17UCSC Ensembl
Outerchr6:29992800..30000495hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg387696
hg197696
hg187696
hg177696
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10810
Supporting Variants
SamplesNA18942
Known GenesHCG4B
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13552
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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