A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13492



Internal ID15492230
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29531576..29532507hg38UCSC Ensembl
Outerchr6:29530983..29533562hg38UCSC Ensembl
Innerchr6:29499353..29500284hg19UCSC Ensembl
Outerchr6:29498760..29501339hg19UCSC Ensembl
Innerchr6:29607332..29608263hg18UCSC Ensembl
Outerchr6:29606739..29609318hg18UCSC Ensembl
Innerchr6:29607332..29608263hg17UCSC Ensembl
Outerchr6:29606739..29609318hg17UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg382580
hg192580
hg182580
hg172580
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10807
Supporting Variants
SamplesNA18942
Known GenesLINC01015
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13492
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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