A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13360



Internal ID15831651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32555156..32555588hg38UCSC Ensembl
Outerchr6:32554609..32556334hg38UCSC Ensembl
Innerchr6:32522933..32523365hg19UCSC Ensembl
Outerchr6:32522386..32524111hg19UCSC Ensembl
Innerchr6:32630911..32631343hg18UCSC Ensembl
Outerchr6:32630364..32632089hg18UCSC Ensembl
Innerchr6:32630911..32631343hg17UCSC Ensembl
Outerchr6:32630364..32632089hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg381726
hg191726
hg181726
hg171726
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA12802
Known GenesHLA-DRB6
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13360
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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